PhD course 2025, day 1

Setup and Preparation

Download today’s slides and hands-on protocol:

• Go to https://drive.google.com/drive/folders/11JcTd5TRKpceICoedEc8DIUBDgFaUqFw?usp=sharing
• Download the file named slides1.zip
• Unzip files
• Protocol: Pdf document named ‘1X – Galaxy Hands-on.pdf’
• Galaxy server: https://usegalaxy.eu/join-training/ucph-gwea2025

Useful Links

Tutorials: https://training.galaxyproject.org/; or at http://vimeo.com/galaxyproject

The different data formats are covered in the UCSC FAQ and here for fastq files: Wikipedia Fastq Page